PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID CCG030467.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Family ERF
Protein Properties Length: 197aa    MW: 22279.8 Da    PI: 4.5559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
CCG030467.1genomeLZUView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP225.82.6e-082253255
          AP2 32 slgkfgtaeeAakaaiaarkkleg 55
                 +lg+f taeeAa+a+++a+  l+g
  CCG030467.1  2 WLGTFETAEEAARAYDEAACLLRG 25
                 9******************99987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.109.7E-15133IPR001471AP2/ERF domain
CDDcd000187.29E-17135No hitNo description
SuperFamilySSF541716.54E-10134IPR016177DNA-binding domain
SMARTSM003802.9E-6139IPR001471AP2/ERF domain
PROSITE profilePS5103212.22133IPR001471AP2/ERF domain
PfamPF008473.3E-4225IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 197 aa     Download sequence    Send to blast
MWLGTFETAE EAARAYDEAA CLLRGSNTRT NFNTHVSSNS PISTKIRNLL NHKRSLKQNS  60
STTPPRNLLL EPALYYFNGI NQENQMFDNA YRPDLSGCFG GLEPVTSQFH PSCSFPSGFD  120
PHIPYIQERM ELPRDVDLLS DASSCVELAE FERMRVERQI SASLHDMNGV NEYFENANDS  180
SEALWDLPTL CQLFCPS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002304856.11e-110hypothetical protein POPTR_0003s21090g
TrEMBLB9GY711e-110B9GY71_POPTR; Uncharacterized protein
STRINGPOPTR_0003s21090.11e-110(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF33413069
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G19790.17e-30related to AP2 11